[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 393 items for (author: walker & s)

EMDB-40180:
MsbA bound to cerastecin C
Method: single particle / : Chen Y, Klein D

EMDB-16441:
Omicron B.1.1.529 2 RBD up conformation
Method: single particle / : Raghavan SSR, Walker MR, Salanti A, Barfod LK, Wang KT

PDB-8c5r:
Omicron B.1.1.529 2 RBD up conformation
Method: single particle / : Raghavan SSR, Walker MR, Salanti A, Barfod LK, Wang KT

EMDB-29930:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor CT1
Method: single particle / : Schenk A, Deniston C, Noeske J

PDB-8gcc:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor CT1
Method: single particle / : Schenk A, Deniston C, Noeske J

EMDB-29790:
30S focus refined map of WT E.coli ribosome complexed with A-site ortho-aminobenzoic acid charged tRNA-Phe
Method: single particle / : Majumdar C, Cate JHD

EMDB-27538:
Lymphocytic choriomeningitis virus glycoprotein in complex with neutralizing antibody M28
Method: single particle / : Moon-Walker A, Hastie KM, Zyla DS, Saphire EO

EMDB-27539:
Lymphocytic choriomeningitis virus glycoprotein
Method: single particle / : Moon-Walker A, Hastie KM, Zyla DS, Saphire EO

PDB-8dmh:
Lymphocytic choriomeningitis virus glycoprotein in complex with neutralizing antibody M28
Method: single particle / : Moon-Walker A, Hastie KM, Zyla DS, Saphire EO

PDB-8dmi:
Lymphocytic choriomeningitis virus glycoprotein
Method: single particle / : Moon-Walker A, Hastie KM, Zyla DS, Saphire EO

EMDB-29786:
Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe
Method: single particle / : Majumdar C, Cate JHD

EMDB-29788:
Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe
Method: single particle / : Majumdar C, Cate JHD

PDB-8g6w:
Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe
Method: single particle / : Majumdar C, Cate JHD

PDB-8g6y:
Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPhe
Method: single particle / : Majumdar C, Cate JHD

EMDB-29787:
Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe
Method: single particle / : Majumdar C, Cate JHD

PDB-8g6x:
Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPhe
Method: single particle / : Majumdar C, Cate JHD

EMDB-27232:
Subtomogram of Fluad vaccine hemagglutinin spiked nanodisc
Method: electron tomography / : Gallagher JR, Audray AK

EMDB-27233:
Tomogram of Flublok vaccine hemagglutinin starfish complexes
Method: electron tomography / : Gallagher JR, Audray AK

EMDB-25699:
VFLIP Spike Trimer with GAR03
Method: single particle / : Sobti M, Stewart AG

EMDB-25700:
VFLIP Spike Trimer with GAR05 FAB
Method: single particle / : Sobti M, Stewart AG, Rouet R, Langley DB

PDB-7t5o:
VFLIP Spike Trimer with GAR03
Method: single particle / : Sobti M, Stewart AG, Rouet R, Langley DB

EMDB-26653:
Native Lassa glycoprotein in complex with neutralizing antibodies 8.9F and 37.2D
Method: single particle / : Li H, Saphire EO

EMDB-26655:
Native Lassa glycoprotein in complex with neutralizing antibodies 12.1F and 37.2D
Method: single particle / : Li H, Saphire EO

PDB-7uot:
Native Lassa glycoprotein in complex with neutralizing antibodies 8.9F and 37.2D
Method: single particle / : Li H, Saphire EO

PDB-7uov:
Native Lassa glycoprotein in complex with neutralizing antibodies 12.1F and 37.2D
Method: single particle / : Li H, Saphire EO

EMDB-26443:
Structure of the DU422 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24
Method: single particle / : Barnes CO, Bjorkman PJ

PDB-7ucg:
Structure of the DU422 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-27024:
Prefusion-stabilized hMPV fusion protein bound to ADI-61026 and MPE8 Fabs
Method: single particle / : Hsieh CL, McLellan JS

PDB-8cw9:
Prefusion-stabilized hMPV fusion protein bound to ADI-61026 and MPE8 Fabs
Method: single particle / : Hsieh CL, McLellan JS

EMDB-25376:
BG505.MD39TS Env trimer in complex with Fab from antibody C05
Method: single particle / : Moore A, Du J, Xu Z, Walker S, Kulp DW, Pallesen J

PDB-7sq1:
BG505.MD39TS Env trimer in complex with Fab from antibody C05
Method: single particle / : Moore A, Du J, Xu Z, Walker S, Kulp DW, Pallesen J

EMDB-26458:
Structure of lineage I (Pinneo) Lassa virus glycoprotein bound to Fab 25.10C
Method: single particle / : Buck TK, Enriquez AE, Hastie KM

EMDB-26594:
Lineage I (Pinneo) Lassa virus glycoprotein bound to 18.5C-M30 Fab
Method: single particle / : Buck TK, Enriquez AS, Hastie KM

PDB-7uds:
Structure of lineage I (Pinneo) Lassa virus glycoprotein bound to Fab 25.10C
Method: single particle / : Buck TK, Enriquez AE, Hastie KM

PDB-7ul7:
Lineage I (Pinneo) Lassa virus glycoprotein bound to 18.5C-M30 Fab
Method: single particle / : Buck TK, Enriquez AS, Hastie KM

EMDB-26195:
Structure of Lassa Virus glycoprotein (Josiah) bound to Fab 25.10C
Method: single particle / : Enriquez AS, Hastie KM

PDB-7tyv:
Structure of Lassa Virus glycoprotein (Josiah) bound to Fab 25.10C
Method: single particle / : Enriquez AS, Hastie KM

EMDB-25574:
SARS-CoV-2 S-RBD + Fab 54042-4
Method: single particle / : Johnson NV, Mclellan JS

PDB-7t01:
SARS-CoV-2 S-RBD + Fab 54042-4
Method: single particle / : Johnson NV, Mclellan JS

EMDB-26064:
SARS-CoV-2 S + Fabs 5317-4 and 5217-10
Method: single particle / : Johnson NV, McLellan JS

EMDB-13316:
HIV-1 Env (BG505 SOSIP.664) in complex with the IgA bNAb 7-269 and the antibody 3BNC117.
Method: single particle / : Fernandez I, Bontems F, Pehau-Arnaudet G, Rey F

EMDB-13332:
HIV-1 Env (BG505 SOSIP.664) in complex with the bNAb 7-176
Method: single particle / : Bontems F, Fernandez I, Pehau-Arnaudet G, Rey F

EMDB-13333:
HIV-1 Env (BG505 SOSIP.664) in complex with the bNAb 7-155
Method: single particle / : Bontems F, Fernandez I, Pehau-Arnaudet G, Rey F

PDB-7pc2:
HIV-1 Env (BG505 SOSIP.664) in complex with the IgA bNAb 7-269 and the antibody 3BNC117.
Method: single particle / : Fernandez I, Bontems F, Pehau-Arnaudet G, Rey F

EMDB-12322:
1918 H1N1 Viral influenza polymerase heterotrimer - Endonuclease and priming loop ordered (Class2a)
Method: single particle / : Keown JR, Carrique L, Fodor E, Grimes JM

EMDB-12323:
1918 H1N1 Viral influenza polymerase heterotrimer - Endonuclease ordered (Class2b)
Method: single particle / : Keown JR, Carrique L, Fodor E, Grimes JM

EMDB-12342:
1918 H1N1 Viral influenza polymerase heterotrimer - full transcriptase (Class1)
Method: single particle / : Keown JR, Carrique L, Fodor E, Grimes JM

EMDB-12348:
1918 H1N1 Viral influenza polymerase heterotrimer - Replicase (class 3)
Method: single particle / : Keown JR, Carrique L, Fodor E, Grimes JM

EMDB-12361:
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8189 core
Method: single particle / : Keown JR, Carrique L, Fodor E, Grimes JM

EMDB-12362:
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8190 core
Method: single particle / : Keown JR, Carrique L, Fodor E, Grimes JM

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more